Genomic location: Pf3D7_01_v3:526,530..536,562(+)
Miles Classification: Core
Product Description: DBL containing protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: N/A
Curated GO (PlasmoDB):
N/AExpression by stage, third quartile (Malaria Cell Atlas): No data
More info:
Zhang Phenotype: Mutable in CDS
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: N/A
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
Protein length: 2900 | Molecular Weight (kDa): 346.566
UniProt ID(s): A0A159SJ85, A0A159SK04, A0A159SKC3, A0A5P0ZZX3, A0A5P1A081, A0A5P1A0L6, A0A5P1A0N7, A0A5P1A1F3, A0A5P1A2U2, Q8I2E0, Q9U4X0
PDB ID(s): None
Isoelectric Point: 5.09
Protein Domain Annotations:
InterPro | IPR008602 | Duffy-antigen binding |
PFam | PF05424 | Duffy-antigen binding |
Superfamily | SSF140924 | N/A |
Old (Pf3D7v3) Gene ID: PF3D7_0113800
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 110 | 108 | 51 | 129 |
disruptive | 462 | 502 | 239 | 602 |
missense | 336 | 382 | 183 | 456 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 132 | 185 | 64 | 145 |
disruptive | 582 | 939 | 354 | 710 |
missense | 403 | 719 | 266 | 391 |
PlasmoDB Total SNPs: 1277
Non-coding: 262 | Synonymous: 264 | Nonsynonymous: 742 | Stop Codon: 9
PMID | Title | Authors | DOI |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |