Genomic location: Pf3D7_05_v3:816,163..819,538(+)
Miles Classification: Core
Product Description: FoP domain-containing protein, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: N/A
Curated GO (PlasmoDB):
| Component | GO:0036396 | RNA N6-methyladenosine methyltransferase complex |
| Component | GO:0005634 | nucleus |
Expression by stage, third quartile (Malaria Cell Atlas):
Ring: 2.20 | Trophozoite: 1.79 | Schizont: 0 | Gametocyte: 1.49
More info:
Zhang Phenotype: Non - Mutable in CDS
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C0H4F1
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
Protein length: 192 | Molecular Weight (kDa): 22.734
UniProt ID(s): C0H4F1
PDB ID(s): None
Isoelectric Point: 11.53
Protein Domain Annotations:
| InterPro | IPR025715 | Chromatin target of PRMT1 protein, C-terminal |
| PFam | PF13865 | Chromatin target of PRMT1 protein, C-terminal |
| Superfamily | N/A | N/A |
Old (Pf3D7v3) Gene ID: PF3D7_0519700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 1 | 8 | 4 | 12 |
| disruptive | 3 | 10 | 9 | 27 |
| missense | 3 | 9 | 8 | 24 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 3 | 14 | 7 | 12 |
| disruptive | 8 | 36 | 14 | 47 |
| missense | 4 | 24 | 14 | 39 |
PlasmoDB Total SNPs: 178
Non-coding: 163 | Synonymous: 12 | Nonsynonymous: 3 | Stop Codon: 0
| PMID | Title | Authors | DOI |
|---|---|---|---|
| 12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |
| 16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |
| 23181666 | Organellar proteomics reveals hundreds of novel nuclear proteins in the malariaparasite Plasmodium falciparum. | Oehring SC, Woodcroft BJ, ..., Voss TS | 10.1186/gb-2012-13-11-r108 |
| 30379851 | Identification of Plasmodium falciparum nuclear proteins by mass spectrometry andproposed protein annotation. | Briquet S, Ourimi A, ..., Vaquero C | 10.1371/journal.pone.0205596 |
| 31384004 | Transcriptome-wide dynamics of extensive m(6)A mRNA methylation during Plasmodiumfalciparum blood-stage development. | Baumgarten S, Bryant JM, ..., Scherf A | 10.1038/s41564-019-0521-7 |