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PF3D7_0930800

Genomic location: Pf3D7_09_v3:1,224,476..1,239,586(+)

Miles Classification: Core

Function and Localization

Product Description: regulator of chromosome condensation, putative

SignalP Peptide: N/A

# Transmembrane Domains: 9

EC Numbers: 4.1.1.39 (Ribulose-bisphosphate carboxylase)

Curated GO (PlasmoDB):

N/A

Expression by stage, third quartile (Malaria Cell Atlas): No data

More info:

Essentiality

Zhang Phenotype: Mutable in CDS

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: N/A

"Best" AlphaFill ligand hit: No AlphaFill hits

BRENDA EC Inhibitors:

4.1.1.39 ribulose-bisphosphate carboxylase O2GSHEDTACABPHCO3-ZnSO4FeSO4Ozonecitratepyruvatearseniteparaquat...

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_198259

No human ortholog(s)

Protein Information

Protein length: 4568 | Molecular Weight (kDa): 546.159

UniProt ID(s): C0H577

PDB ID(s): None

Isoelectric Point: 9.16

Protein Domain Annotations:

InterPro IPR000408 Regulator of chromosome condensation, RCC1
InterPro IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
InterPro IPR020878 Ribulose bisphosphate carboxylase, large chain, active site
PFam PF00415 Regulator of chromosome condensation, RCC1
Superfamily SSF50985 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0930800

Resistome Missense Mutations: N1477S

Resistome Compounds with Missense Mutations: ELQ300

Resistome # Samples with Disruptive Mutations: 4 (4 missense, 0 "interesting" missense)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 39 176 101 228
disruptive 88 400 251 660
missense 61 343 234 561

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 57 358 158 258
disruptive 199 879 438 960
missense 118 707 342 690

PlasmoDB Total SNPs: 414

Non-coding: 104 | Synonymous: 159 | Nonsynonymous: 151 | Stop Codon: 0

Associated Publications

PMID Title Authors DOI
12368867 Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, Pain A, ..., Barrell BG 10.1038/nature01095
16267556 A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, Vignali M, ..., Hughes RE 10.1038/nature04104