About Gene List Toggle Layout

PF3D7_1223500

Genomic location: Pf3D7_12_v3:946,864..961,465(-)

Miles Classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: N/A

Curated GO (PlasmoDB):

Component GO:0005887 integral component of plasma membrane
Function GO:0038023 signaling receptor activity

Expression by stage, third quartile (Malaria Cell Atlas):

Ring: 1.51 | Trophozoite: 2.16 | Schizont: 1.84 | Gametocyte: 2.55

More info:

Essentiality

Zhang Phenotype: Non - Mutable in CDS

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: Not tested (Pb ortholog: PBANKA_1438400)

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: N/A

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_532769

No human ortholog(s)

Protein Information

Protein length: 4505 | Molecular Weight (kDa): 544.357

UniProt ID(s): A0A144A125

PDB ID(s): None

Isoelectric Point: 9.13

Protein Domain Annotations:

InterPro IPR017241 Toll-like receptor
PFam N/A N/A
Superfamily N/A N/A

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1223500

Resistome Missense Mutations: E1617K, R3757K

Resistome Compounds with Missense Mutations: Harzianin, RP-8

Resistome # Samples with Disruptive Mutations: 4 (2 missense, 2 "interesting" missense)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 27 129 81 222
disruptive 122 369 216 607
missense 82 317 189 512

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 42 269 157 272
disruptive 226 870 420 969
missense 134 651 331 715

PlasmoDB Total SNPs: 443

Non-coding: 53 | Synonymous: 228 | Nonsynonymous: 162 | Stop Codon: 0

Associated Publications

PMID Title Authors DOI
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097