Genomic location: Pf3D7_12_v3:946,864..961,465(-)
Miles Classification: Core
Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: N/A
Curated GO (PlasmoDB):
Component | GO:0005887 | integral component of plasma membrane |
Function | GO:0038023 | signaling receptor activity |
Expression by stage, third quartile (Malaria Cell Atlas):
Ring: 1.51 | Trophozoite: 2.16 | Schizont: 1.84 | Gametocyte: 2.55
More info:
Zhang Phenotype: Non - Mutable in CDS
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Not tested (Pb ortholog: PBANKA_1438400)
More info: PhenoPlasm Link
AlphaFill Uniprot ID: N/A
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
Protein length: 4505 | Molecular Weight (kDa): 544.357
UniProt ID(s): A0A144A125
PDB ID(s): None
Isoelectric Point: 9.13
Protein Domain Annotations:
InterPro | IPR017241 | Toll-like receptor |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
Old (Pf3D7v3) Gene ID: PF3D7_1223500
Resistome Missense Mutations: E1617K, R3757K
Resistome Compounds with Missense Mutations: Harzianin, RP-8
Resistome # Samples with Disruptive Mutations: 4 (2 missense, 2 "interesting" missense)
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 27 | 129 | 81 | 222 |
disruptive | 122 | 369 | 216 | 607 |
missense | 82 | 317 | 189 | 512 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 42 | 269 | 157 | 272 |
disruptive | 226 | 870 | 420 | 969 |
missense | 134 | 651 | 331 | 715 |
PlasmoDB Total SNPs: 443
Non-coding: 53 | Synonymous: 228 | Nonsynonymous: 162 | Stop Codon: 0
PMID | Title | Authors | DOI |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |