Genomic location: Pf3D7_14_v3:1,742,097..1,750,189(+)
Miles Classification: Core
Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: N/A
Curated GO (PlasmoDB):
N/AExpression by stage, third quartile (Malaria Cell Atlas): No data
More info:
Zhang Phenotype: Mutable in CDS
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IL44
"Best" AlphaFill ligand hit: RHQ (rhodamine 6g, Local RMSD=2.56) with 3BR5 (Global RMSD=42.67)
No associated EC numbersNo evidence of orthology to BindingDB entries
Protein length: 2511 | Molecular Weight (kDa): 300.98
UniProt ID(s): Q8IL44
PDB ID(s): None
Isoelectric Point: 9.62
Protein Domain Annotations:
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
Old (Pf3D7v3) Gene ID: PF3D7_1442700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 20 | 105 | 66 | 170 |
disruptive | 103 | 466 | 254 | 603 |
missense | 91 | 438 | 245 | 541 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 33 | 226 | 106 | 187 |
disruptive | 202 | 882 | 383 | 653 |
missense | 155 | 807 | 350 | 544 |
PlasmoDB Total SNPs: 273
Non-coding: 42 | Synonymous: 100 | Nonsynonymous: 128 | Stop Codon: 3
PMID | Title | Authors | DOI |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |